write_vtk_skeleton_file¶

visualize.vtk.write_vtk_skeleton_file(lookup_table, out_name, out_dir, point_scalar_data=None, n_decimals=2)¶

Write out a .vtk file for a neuron morphology.

This method is used by write_vtk_frames().

Parameters:¶

lookup_table : pd.DataFrame¶

Lookup table for the neuron morphology. Can be accessed from visualize.cell_morphology_visualizer.CellMorphologyVisualizer.

out_name : str¶

Name of the output file.

out_dir : str¶

Directory to save the file to.

point_scalar_data : dict, optional¶

Dictionary containing scalar data for each point. Defaults to None.

Returns:¶

None. Writes out a .vtk file to the specified directory.