❭ API reference ❭ config ❭

config

Configuration for ISF

This package provides ISF-wide configuration settings, such as dask memory overflow, file locking server configuration, logging configuration, cell types etc. In general, these settings may change when switching hardware or animal species, but are unlikely to be varied otherwise.

Functions

isf_is_using_legacy_mdb()

Check if ISF is configured to use model_data_base

get_default_db()

Get the database class to be used by default throughout ISF.

get_db_register_path()

Get the path to the database register.

get_default_db_dumper()

Get the default database dumper.

get_meta_file_format()

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Modules

cell_types

Cell type configuration.

file_locking

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isf_configure

Configure ISF for your local system.

isf_logging

Set up logging for ISF.