❭ API reference ❭ config ❭

user

User-specific configuration

These configuration modules allow the user to set per-project configuration. These are ideally set once for a specific project, and left unchanged after that.

Beware when relying on default fallback values, as it makes your code less explicit. It is always recommended to explicitly pass your data sources to the relevant workflows, rather than relying on some default fallback values set here.

Modules

cell_types

Cell type configuration.

morphology

Configure label names for .hoc and .swc morphology files.

network_activity

Configure default locations to look for data, when not explicitly given in those pipelines that require it

network_connectivity

Configure the default values for synapse mapping and network connectivity workflows in ISF.