simrun ❭ parameters_to_cell ❭ parameters_to_cell
parameters_to_cell¶
- simrun.parameters_to_cell.parameters_to_cell(neuronParam, networkParam, synfile=None, dirPrefix='', tStop=345.0, scale_apical=None, range_vars=None, allPoints=False, cell=None, evokedNW=None)¶
Rebuild and simulate a network-embedded cell.
Rebuild the cell from a Cell parameters file. If specified, the synapses in the .syn file are reconnected and simulated according to the parameters defined in the Network parameters file. If no .syn file is provided, a new network embedding is created based on the Network parameters file.
- Parameters:¶
neuronParam (str) – Path to Cell parameters file.
networkParam (str) – Path to Network parameters file.
synfile (str) – Path to the realized synapses in .syn format.
dirPrefix (str) – Prefix for the directory where the results are stored.
tStop (float) – Time in ms at which the simulation should stop.
scale_apical (callable, DEPRECATED) – Function to scale the apical dendrite.
range_vars (str or list) – Range variables to record.
allPoints (bool) – Record all points in the cell.
cell (Cell) – A cell object to use for the simulation.
evokedNW (NetworkMapper) – A network object to use for the simulation.
Deprecated since version 0.1: The scale_apical argument is deprecated. Use the cell_modify_funs key in the Cell parameters file instead.