simrun ❭ generate_synapse_activations ❭ generate_synapse_activations

generate_synapse_activations¶

simrun.generate_synapse_activations.generate_synapse_activations(cellParamName, evokedUpParamName, dirPrefix='', nSweeps=1000, nprocs=40, tStop=345, silent=True)¶

Generates nSweeps * nprocs synapse activation files and writes them to the folder dirPrefix/results/simName.

For each process, a new seed is generated using the seed generator.

Parameters:¶

cellParamName (str) – Path to a Cell parameters file, containing information about the neuron morphology (link to a .hoc file) and biophysical properties.
evokedUpParamName (str) – Path to a Network parameters file, containing information on synapse and network parameters per cell type.
nSweeps – number of synapse activations per process
nprocs – number of independent processes
tStop – time in ms at which the synaptic input should stop.

Parameters:¶

cellParamName (str) – Path to cell parameter file.

Returns:¶

Can be computed with arbitrary scheduler. Computing delayed object returns List of lists. Each child list contains the paths of the synapse activation files generated by one worker

Return type:¶

dask.delayed