biophysics_fitting ❭ L5tt_parameter_setup ❭ set_ephys

set_ephys

biophysics_fitting.L5tt_parameter_setup.set_ephys(cell_param, params=None)

Updates cell_param file.

Parameter names reflect the Hay naming convention.

Parameters:

  • cell_param (ParameterSet) – The cell parameter dictionary.

  • params (pd.Series) – The parameter vector as a pandas Series.

Raises:

  • AssertionError – If the parameter vector is None or not a pandas Series.

  • AssertionError – If the provided cell parameters lack a field that is however defined in the parameter vector.

  • AssertionError – If some parameters are not set after the update.

Returns:

The updated cell_param, with the biphysical parameters set.

Return type:

ParameterSet

See also

See Hay et al. [2] for more information.