run_fun¶
-
biophysics_fitting.simulator.run_fun(cell, T=
34.0, Vinit=-75.0, dt=0.025, recordingSites=[], tStart=0.0, tStop=250.0, vardt=True, silent=True)¶ Default function to run a simulation.
- Parameters:¶
- cell¶
The cell object.
- T : float¶
The temperature (Celsius).
- Vinit : float¶
The initial voltage (mV).
- dt : float¶
The time step (ms).
- recordingSites : [float]¶
The recording sites (um).
- tStart : float¶
The start time of the simulation (ms).
- tStop : float¶
The stop time of the simulation (ms).
- vardt : bool¶
Whether to use variable time step.
- silent : bool¶
Whether to suppress output.
- Returns:¶
The cell object, containing simulation data.
- Return type:¶
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