API referencesingle_cell_parserio

activity

Read and write activity data

Functions

read_synapse_weight_file(fname)

Reads list of all anatomical synapses and their maximum conductance values.

read_synapse_activation_file(fname)

Reads list of all functional synapses and their activation times.

read_complete_synapse_activation_file(fname)

Reads list of all functional synapses and their activation times.

read_spike_times_file(fname)

Reads all trials and spike times within these trials.

write_all_traces(fname, t, vTraces)

Write out a list of voltage traces.

write_synapse_activation_file(fname, cell, synTypes, synDistances, synTimes, activeSyns)

Write out a Synapse activation file.

write_synapse_weight_file(fname, cell)

Write out a synapse weight file.

write_PSTH(fname, PSTH, bins)

Write PSTH and time bins of PSTH,

write_spike_times_file(fname, spikeTimes)

Write trial numbers and all spike times in each trial (may be empty).

write_presynaptic_spike_times(fname, cells)

Write cell type, presynaptic cell ID and spike times of all connected