compute_syn_distances¶

single_cell_parser.analyze.synanalysis.compute_syn_distances(cell, synType, label=None, consider_gap_to_soma=False)¶

Computes distances (to soma) of all synapses on the dendrite.

Parameters:¶

cell : single_cell_parser.cell.Cell¶

cell object with attached synapses.

synType : str¶

presynaptic cell type to compute distances for.

label : str, optional¶

dendrite type (e.g. “ApicalDendrite”) to compute distances for. Default: None (all dendrites)

Returns:¶

1D array of distances to soma

Return type:¶

numpy.ndarray

Raises:¶

KeyError – if the cell does not have synapses of type synType.