❭ API reference ❭ biophysics_fitting ❭ hay ❭

evaluation

A Python translation of the evaluation functions used in Hay et al. [2]. This module provides methods to run Hay’s stimulus protocols, and evaluate the resulting voltage traces.

Classes

BAC

Evaluate the \(BAC\) stimulus protocol.

bAP

Evaluate the \(bAP\) stimulus protocol.

_Step

Template class for evaluating step current injections.

StepOne

Evaluate Step current one.

StepTwo

Evaluate Step current two.

StepThree

Evaluate Step current three.

Functions

normalize(raw, mean, std)

Normalize a raw value.

nan_if_error(fun)

Wrapper method that returns nan if an error occurs.

get_evaluate_bAP(**kwargs)

Get the evaluation function for the \(bAP\) stimulus protocol.

get_evaluate_BAC(**kwargs)

Get the evaluation function for the \(BAC\) stimulus protocol.

get_evaluate_StepOne(**kwargs)

Get the evaluation function for the \(StepOne\) stimulus protocol.

get_evaluate_StepTwo(**kwargs)

Get the evaluation function for the \(StepTwo\) stimulus protocol.

get_evaluate_StepThree(**kwargs)

Get the evaluation function for the \(StepThree\) stimulus protocol.

hay_evaluate_bAP(**kwargs)

Evaluate the \(bAP\) stimulus protocol.

hay_evaluate_BAC(**kwargs)

Evaluate the \(BAC\) stimulus protocol.

hay_evaluate_StepOne(**kwargs)

Evaluate the \(StepOne\) stimulus protocol.

hay_evaluate_StepTwo(**kwargs)

Evaluate the \(StepTwo\) stimulus protocol.

hay_evaluate_StepThree(**kwargs)

Evaluate the \(StepTwo\) stimulus protocol.

Attributes

objectives_step

-

objectives_BAC

-