biophysics_fitting ❭ hay ❭ specification ❭ get_feasible_model_params

get_feasible_model_params¶

biophysics_fitting.hay.specification.get_feasible_model_params()¶

Get a set of feasible model parameters.

This dataframe contains biophysical parameters that are not only within range, but also likely values to find. They are however not guaranteed to yield realistic responses to a stimulus, when applied to a L5PT. In general, the response of a cell with these biophysical parameters heavily depends on the morphology as well.

Conductance parameters (\(\bar{g}\) or \(g\_{pas}\)) are in units of \(S/cm^2\), \(\tau\) parameters are in units of \(ms\) and \(\gamma\) parameters are a fraction and unitless.

Returns:¶

A DataFrame with the parameter names as index, feasible values as column ‘x’, and the min and max.

Return type:¶

pd.DataFrame

Note

The parameters are specific to the L5PT and the Hay stimulus protocol. See Hay et al. [2].