❭ API reference ❭ singlecell_input_mapper ❭ udvary2022 ❭

cell

Classes for setting up a cell morphology and mapping synapses onto it.

Used to create network realizations. For functional network realizations (i.e. known presynaptic origin of each synapse), see single_cell_parser.network

Classes

Cell

Cell object for mapping synapses onto a morphology.

PySection2

Convenience class around NEURON’s Section class.

PointCell

Cell object without morphological or biophysical attributes.

Synapse

Leightweight dataclass to store basic synapse information.

CellParser

Extract cell morphology from an AMIRA hoc file.